Web Resources

Tools

ExPASy-ProtParam: Computes parameters for a given protein, including molecular weight, pI, extinction coefficient, etc.
Oligo Calc: Calucate the melting temperature and other properties of oligos such as primers.
BLAST: Search for sequence homology using DNA or protein sequence.
Fluorescence SpectraViewer: Find the excitation and emission wavelengths of different fluorophores.
Phosphate Buffer Calculator: Calculates ratio of monosodium and disodium phosphate for buffer of a target pH.

Databases

PubMed: Database for most publications related to biochemistry.
RCSB Protein Data Bank: Database for all deposited biomacromolecule structures
OpenWetWare: "Wiki" site for biochemistry wet lab protocols and reagents.
PubChem: Database for chemical structures
PhosphositePlus: Database for known post translational modifications on proteins.